Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm24420-201ENSMUST00000176676 59 ntBASIC17.31■□□□□ 0.36
Sned1Q70E20 Gm8927-201ENSMUST00000181978 981 ntBASIC17.31■□□□□ 0.36
Sned1Q70E20 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.31■□□□□ 0.36
Sned1Q70E20 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.31■□□□□ 0.36
Sned1Q70E20 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Gm3222-201ENSMUST00000071282 990 ntBASIC17.31■□□□□ 0.36
Sned1Q70E20 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.31■□□□□ 0.36
Sned1Q70E20 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.31■□□□□ 0.36
Sned1Q70E20 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sned1Q70E20 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sned1Q70E20 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sned1Q70E20 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Gm1335-201ENSMUST00000121653 386 ntBASIC17.3■□□□□ 0.36
Sned1Q70E20 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.3■□□□□ 0.36
Sned1Q70E20 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.3■□□□□ 0.36
Sned1Q70E20 Gm38341-201ENSMUST00000195357 515 ntBASIC17.3■□□□□ 0.36
Sned1Q70E20 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.3■□□□□ 0.36
Sned1Q70E20 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.3■□□□□ 0.36
Sned1Q70E20 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Sned1Q70E20 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.3■□□□□ 0.36
Sned1Q70E20 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.3■□□□□ 0.36
Sned1Q70E20 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sned1Q70E20 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.3■□□□□ 0.36
Sned1Q70E20 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sned1Q70E20 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.3■□□□□ 0.36
Sned1Q70E20 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Sned1Q70E20 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.3■□□□□ 0.36
Sned1Q70E20 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sned1Q70E20 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.3■□□□□ 0.36
Sned1Q70E20 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sned1Q70E20 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sned1Q70E20 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sned1Q70E20 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC17.29■□□□□ 0.36
Sned1Q70E20 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.29■□□□□ 0.36
Sned1Q70E20 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.29■□□□□ 0.36
Sned1Q70E20 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.29■□□□□ 0.36
Sned1Q70E20 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.29■□□□□ 0.36
Sned1Q70E20 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sned1Q70E20 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sned1Q70E20 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sned1Q70E20 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.28■□□□□ 0.36
Sned1Q70E20 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Sned1Q70E20 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sned1Q70E20 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sned1Q70E20 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sned1Q70E20 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sned1Q70E20 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sned1Q70E20 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sned1Q70E20 Gm37008-201ENSMUST00000195712 319 ntBASIC17.28■□□□□ 0.36
Sned1Q70E20 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.28■□□□□ 0.36
Sned1Q70E20 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.28■□□□□ 0.36
Sned1Q70E20 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sned1Q70E20 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sned1Q70E20 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sned1Q70E20 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sned1Q70E20 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms