Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nup98Q6PFD9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Nup98Q6PFD9 Gm11478-201ENSMUST00000117851 599 ntBASIC16.96■□□□□ 0.3
Nup98Q6PFD9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Nup98Q6PFD9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.96■□□□□ 0.3
Nup98Q6PFD9 Gm43433-201ENSMUST00000196573 481 ntBASIC16.96■□□□□ 0.3
Nup98Q6PFD9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nup98Q6PFD9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.96■□□□□ 0.3
Nup98Q6PFD9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.3
Nup98Q6PFD9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Nup98Q6PFD9 Gm25857-201ENSMUST00000082788 129 ntBASIC16.96■□□□□ 0.3
Nup98Q6PFD9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nup98Q6PFD9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Nup98Q6PFD9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup98Q6PFD9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.94■□□□□ 0.3
Nup98Q6PFD9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Gm19078-201ENSMUST00000206311 727 ntBASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Gm5356-201ENSMUST00000093326 615 ntBASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup98Q6PFD9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms