Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Gm4984-201ENSMUST00000115987 360 ntBASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Gm28911-201ENSMUST00000188837 117 ntBASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.79□□□□□ -0.36
Snrnp40Q6PE01 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Gm27892-201ENSMUST00000185017 106 ntBASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Snrnp40Q6PE01 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snrnp40Q6PE01 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snrnp40Q6PE01 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Snrnp40Q6PE01 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snrnp40Q6PE01 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snrnp40Q6PE01 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Snrnp40Q6PE01 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Snrnp40Q6PE01 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Snrnp40Q6PE01 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Snrnp40Q6PE01 Gm12341-201ENSMUST00000119724 503 ntBASIC12.77□□□□□ -0.37
Snrnp40Q6PE01 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.77□□□□□ -0.37
Snrnp40Q6PE01 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.77□□□□□ -0.37
Snrnp40Q6PE01 Mir6420-201ENSMUST00000185032 102 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms