Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb4Q6P8W9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Gm2810-201ENSMUST00000118681 990 ntBASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Gm38225-201ENSMUST00000194001 393 ntBASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb4Q6P8W9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Gm8410-201ENSMUST00000117225 605 ntBASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Gm6415-201ENSMUST00000118488 348 ntBASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Gm38294-201ENSMUST00000192831 381 ntBASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb4Q6P8W9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms