Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Gm16198-201ENSMUST00000118766 670 ntBASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Gm13464-201ENSMUST00000119418 935 ntBASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Gm9726-201ENSMUST00000180321 678 ntBASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Gm5177-201ENSMUST00000183092 997 ntBASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Thap2-203ENSMUST00000218989 527 ntBASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Psmb5-202ENSMUST00000227257 622 ntBASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf6Q6NVF9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf6Q6NVF9 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms