Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Gm12882-201ENSMUST00000121696 517 ntBASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Gm5866-201ENSMUST00000177881 973 ntBASIC17.12■□□□□ 0.33
Krt40Q6IFX3 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.12■□□□□ 0.33
Krt40Q6IFX3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Gm2423-201ENSMUST00000074863 733 ntBASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt40Q6IFX3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Gm24694-201ENSMUST00000180054 110 ntBASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Gm27663-201ENSMUST00000184839 110 ntBASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Gm7730-201ENSMUST00000212486 454 ntBASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt40Q6IFX3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Gm15321-201ENSMUST00000121290 288 ntBASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Gm16215-201ENSMUST00000161990 637 ntBASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Gm29667-201ENSMUST00000190817 490 ntBASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.1■□□□□ 0.33
Krt40Q6IFX3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Gm6916-202ENSMUST00000205523 195 ntBASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Sybu-209ENSMUST00000228639 4113 ntBASIC17.09■□□□□ 0.33
Krt40Q6IFX3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt40Q6IFX3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Krt40Q6IFX3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms