Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Gm8810-201ENSMUST00000172895 754 ntBASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Gm12485-201ENSMUST00000119641 291 ntBASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Gm37259-201ENSMUST00000193903 849 ntBASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Gm38671-201ENSMUST00000200573 130 ntBASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Knl1Q66JQ7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Gm11793-201ENSMUST00000120433 981 ntBASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Gm26083-201ENSMUST00000157904 193 ntBASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 AC133598.1-201ENSMUST00000224327 660 ntBASIC20.18■□□□□ 0.82
Knl1Q66JQ7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Knl1Q66JQ7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Gm2639-201ENSMUST00000156881 1297 ntBASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Gm27682-201ENSMUST00000183930 110 ntBASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Gm27772-201ENSMUST00000184900 187 ntBASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Gm43133-201ENSMUST00000197472 463 ntBASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Knl1Q66JQ7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Gm6152-201ENSMUST00000151704 340 ntBASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Gm4271-201ENSMUST00000174444 973 ntBASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Gm27516-201ENSMUST00000184237 98 ntBASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Gm43818-201ENSMUST00000200605 466 ntBASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Knl1Q66JQ7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Knl1Q66JQ7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Knl1Q66JQ7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Knl1Q66JQ7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Knl1Q66JQ7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Knl1Q66JQ7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Knl1Q66JQ7 Gm37015-201ENSMUST00000192763 1521 ntBASIC20.15■□□□□ 0.82
Knl1Q66JQ7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Knl1Q66JQ7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Knl1Q66JQ7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Knl1Q66JQ7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms