Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ift88Q61371 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Ift88Q61371 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Ift88Q61371 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Ift88Q61371 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.18■□□□□ 0.18
Ift88Q61371 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.18■□□□□ 0.18
Ift88Q61371 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ift88Q61371 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.18■□□□□ 0.18
Ift88Q61371 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.18■□□□□ 0.18
Ift88Q61371 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.18■□□□□ 0.18
Ift88Q61371 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Gm24589-201ENSMUST00000116692 94 ntBASIC16.17■□□□□ 0.18
Ift88Q61371 Gm9103-201ENSMUST00000119371 405 ntBASIC16.17■□□□□ 0.18
Ift88Q61371 Gm13464-201ENSMUST00000119418 935 ntBASIC16.17■□□□□ 0.18
Ift88Q61371 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.17■□□□□ 0.18
Ift88Q61371 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.17■□□□□ 0.18
Ift88Q61371 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ift88Q61371 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.17■□□□□ 0.18
Ift88Q61371 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ift88Q61371 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.17■□□□□ 0.18
Ift88Q61371 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.17■□□□□ 0.18
Ift88Q61371 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ift88Q61371 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ift88Q61371 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ift88Q61371 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ift88Q61371 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Gm7862-201ENSMUST00000121461 292 ntBASIC16.16■□□□□ 0.18
Ift88Q61371 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.16■□□□□ 0.18
Ift88Q61371 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ift88Q61371 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Gm21362-201ENSMUST00000194272 928 ntBASIC16.16■□□□□ 0.18
Ift88Q61371 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ift88Q61371 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.16■□□□□ 0.18
Ift88Q61371 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ift88Q61371 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.16■□□□□ 0.18
Ift88Q61371 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ift88Q61371 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Ift88Q61371 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ift88Q61371 Gm7153-201ENSMUST00000117092 455 ntBASIC16.15■□□□□ 0.18
Ift88Q61371 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ift88Q61371 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ift88Q61371 Gm7977-201ENSMUST00000193787 748 ntBASIC16.15■□□□□ 0.18
Ift88Q61371 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.15■□□□□ 0.18
Ift88Q61371 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ift88Q61371 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ift88Q61371 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.15■□□□□ 0.18
Ift88Q61371 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.15■□□□□ 0.18
Ift88Q61371 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.15■□□□□ 0.18
Ift88Q61371 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.15■□□□□ 0.18
Ift88Q61371 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms