Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clns1aQ61189 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.5□□□□□ -0.41
Clns1aQ61189 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clns1aQ61189 Gm15565-201ENSMUST00000118890 427 ntBASIC12.5□□□□□ -0.41
Clns1aQ61189 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.5□□□□□ -0.41
Clns1aQ61189 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.5□□□□□ -0.41
Clns1aQ61189 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Gm43767-201ENSMUST00000198933 381 ntBASIC12.5□□□□□ -0.41
Clns1aQ61189 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Clns1aQ61189 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Clns1aQ61189 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clns1aQ61189 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.5□□□□□ -0.41
Clns1aQ61189 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.5□□□□□ -0.41
Clns1aQ61189 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clns1aQ61189 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.49□□□□□ -0.41
Clns1aQ61189 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clns1aQ61189 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.49□□□□□ -0.41
Clns1aQ61189 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Gm11950-201ENSMUST00000121615 838 ntBASIC12.49□□□□□ -0.41
Clns1aQ61189 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.49□□□□□ -0.41
Clns1aQ61189 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.49□□□□□ -0.41
Clns1aQ61189 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clns1aQ61189 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Clns1aQ61189 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Clns1aQ61189 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.49□□□□□ -0.41
Clns1aQ61189 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.49□□□□□ -0.41
Clns1aQ61189 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clns1aQ61189 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.48□□□□□ -0.41
Clns1aQ61189 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Clns1aQ61189 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clns1aQ61189 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Clns1aQ61189 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.48□□□□□ -0.41
Clns1aQ61189 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.48□□□□□ -0.41
Clns1aQ61189 Gm15794-201ENSMUST00000120182 631 ntBASIC12.48□□□□□ -0.41
Clns1aQ61189 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clns1aQ61189 Gm25745-201ENSMUST00000174945 133 ntBASIC12.48□□□□□ -0.41
Clns1aQ61189 Gm6345-202ENSMUST00000180900 204 ntBASIC12.48□□□□□ -0.41
Clns1aQ61189 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.48□□□□□ -0.41
Clns1aQ61189 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clns1aQ61189 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.48□□□□□ -0.41
Clns1aQ61189 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms