Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.34□□□□□ -0.43
Scarb1Q61009 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scarb1Q61009 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scarb1Q61009 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scarb1Q61009 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scarb1Q61009 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.33□□□□□ -0.44
Scarb1Q61009 Acot6-202ENSMUST00000222921 3622 ntBASIC12.33□□□□□ -0.44
Scarb1Q61009 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.33□□□□□ -0.44
Scarb1Q61009 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Gm27867-201ENSMUST00000184778 125 ntBASIC12.33□□□□□ -0.44
Scarb1Q61009 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Scarb1Q61009 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scarb1Q61009 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.32□□□□□ -0.44
Scarb1Q61009 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scarb1Q61009 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Scarb1Q61009 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.32□□□□□ -0.44
Scarb1Q61009 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Scarb1Q61009 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 AA414768-201ENSMUST00000121924 1257 ntBASIC12.32□□□□□ -0.44
Scarb1Q61009 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scarb1Q61009 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.32□□□□□ -0.44
Scarb1Q61009 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Scarb1Q61009 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scarb1Q61009 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scarb1Q61009 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.31□□□□□ -0.44
Scarb1Q61009 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.31□□□□□ -0.44
Scarb1Q61009 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.31□□□□□ -0.44
Scarb1Q61009 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.31□□□□□ -0.44
Scarb1Q61009 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scarb1Q61009 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms