Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Gm13612-201ENSMUST00000119276 390 ntBASIC14.17□□□□□ -0.14
Col12a1Q60847 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Olfr286-202ENSMUST00000205305 969 ntBASIC14.17□□□□□ -0.14
Col12a1Q60847 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.16□□□□□ -0.14
Col12a1Q60847 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.16□□□□□ -0.14
Col12a1Q60847 Gm43138-201ENSMUST00000199123 708 ntBASIC14.16□□□□□ -0.14
Col12a1Q60847 Gm43947-201ENSMUST00000203019 959 ntBASIC14.16□□□□□ -0.14
Col12a1Q60847 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.16□□□□□ -0.14
Col12a1Q60847 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col12a1Q60847 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.16□□□□□ -0.14
Col12a1Q60847 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Gm26464-201ENSMUST00000157094 305 ntBASIC14.16□□□□□ -0.14
Col12a1Q60847 Gm4804-201ENSMUST00000182234 999 ntBASIC14.16□□□□□ -0.14
Col12a1Q60847 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.16□□□□□ -0.14
Col12a1Q60847 Cts7-204ENSMUST00000225321 1257 ntBASIC14.16□□□□□ -0.14
Col12a1Q60847 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col12a1Q60847 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col12a1Q60847 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col12a1Q60847 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.15□□□□□ -0.14
Col12a1Q60847 Gm44364-201ENSMUST00000198368 141 ntBASIC14.15□□□□□ -0.14
Col12a1Q60847 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.15□□□□□ -0.14
Col12a1Q60847 Gm5425-201ENSMUST00000214125 459 ntBASIC14.15□□□□□ -0.14
Col12a1Q60847 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.15□□□□□ -0.14
Col12a1Q60847 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.15□□□□□ -0.14
Col12a1Q60847 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Gm43094-201ENSMUST00000196549 921 ntBASIC14.15□□□□□ -0.14
Col12a1Q60847 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.15□□□□□ -0.14
Col12a1Q60847 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col12a1Q60847 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.15□□□□□ -0.14
Col12a1Q60847 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.15□□□□□ -0.14
Col12a1Q60847 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col12a1Q60847 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Gm9368-201ENSMUST00000219348 831 ntBASIC14.15□□□□□ -0.14
Col12a1Q60847 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col12a1Q60847 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm1335-201ENSMUST00000121653 386 ntBASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm29396-201ENSMUST00000185659 716 ntBASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm43133-201ENSMUST00000197472 463 ntBASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm29705-201ENSMUST00000212598 474 ntBASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm8227-201ENSMUST00000223306 571 ntBASIC14.14□□□□□ -0.15
Col12a1Q60847 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col12a1Q60847 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col12a1Q60847 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.14□□□□□ -0.15
Col12a1Q60847 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm13297-201ENSMUST00000120205 934 ntBASIC14.14□□□□□ -0.15
Col12a1Q60847 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.14□□□□□ -0.15
Col12a1Q60847 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm6334-201ENSMUST00000207083 228 ntBASIC14.14□□□□□ -0.15
Col12a1Q60847 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Col12a1Q60847 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.14□□□□□ -0.15
Col12a1Q60847 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col12a1Q60847 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms