Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfaip3Q60769 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfaip3Q60769 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
Tnfaip3Q60769 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tnfaip3Q60769 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Tnfaip3Q60769 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfaip3Q60769 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfaip3Q60769 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.76□□□□□ -0.21
Tnfaip3Q60769 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Gm8749-201ENSMUST00000117737 331 ntBASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Gm9824-201ENSMUST00000178707 561 ntBASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfaip3Q60769 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Gm5479-201ENSMUST00000160578 435 ntBASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Gm25948-201ENSMUST00000175334 112 ntBASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Gm44872-201ENSMUST00000207864 420 ntBASIC13.74□□□□□ -0.21
Tnfaip3Q60769 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Tnfaip3Q60769 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Gm27430-201ENSMUST00000184585 107 ntBASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Gm44333-201ENSMUST00000197168 107 ntBASIC13.73□□□□□ -0.21
Tnfaip3Q60769 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms