Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Gm12091-201ENSMUST00000146791 830 ntBASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Mir7654-201ENSMUST00000185082 70 ntBASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scaf1Q5U4C3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scaf1Q5U4C3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Gm37437-201ENSMUST00000194451 1937 ntBASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scaf1Q5U4C3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.92■□□□□ 0.62
Scaf1Q5U4C3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf1Q5U4C3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scaf1Q5U4C3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf1Q5U4C3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scaf1Q5U4C3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scaf1Q5U4C3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.92■□□□□ 0.62
Scaf1Q5U4C3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms