Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav3-1Q5R1I8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Trav3-1Q5R1I8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Gm38285-201ENSMUST00000192928 922 ntBASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Gm9207-201ENSMUST00000198773 1115 ntBASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3-1Q5R1I8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms