Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5d-4Q5R1F6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Gm1401-201ENSMUST00000122048 772 ntBASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Gm5177-201ENSMUST00000183092 997 ntBASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Thap2-203ENSMUST00000218989 527 ntBASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5d-4Q5R1F6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Gm5364-201ENSMUST00000216789 889 ntBASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5d-4Q5R1F6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms