Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-3Q5R1E6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
Trav6-3Q5R1E6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Gm11452-201ENSMUST00000122376 690 ntBASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Gm27300-201ENSMUST00000184085 97 ntBASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Gm27335-201ENSMUST00000184758 97 ntBASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Gm17971-201ENSMUST00000190239 806 ntBASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-3Q5R1E6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms