Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.75■□□□□ 0.27
Ckap2Q3V1H1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Gm43575-201ENSMUST00000196420 516 ntBASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ckap2Q3V1H1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap2Q3V1H1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm29310-201ENSMUST00000185468 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21825-201ENSMUST00000185728 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm29109-201ENSMUST00000185895 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21896-201ENSMUST00000186520 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21873-201ENSMUST00000186728 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21794-201ENSMUST00000187056 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21880-201ENSMUST00000187275 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21826-201ENSMUST00000187451 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21198-201ENSMUST00000188393 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21749-201ENSMUST00000189343 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21901-201ENSMUST00000189568 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm29424-201ENSMUST00000189716 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm28599-201ENSMUST00000189838 694 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21867-201ENSMUST00000189917 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm29269-201ENSMUST00000190087 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21722-201ENSMUST00000190153 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm28423-201ENSMUST00000190701 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21899-201ENSMUST00000190745 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21910-201ENSMUST00000191163 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21849-201ENSMUST00000191571 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm28678-201ENSMUST00000191593 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm20910-201ENSMUST00000193268 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm21871-201ENSMUST00000194621 696 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.72■□□□□ 0.27
Ckap2Q3V1H1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms