Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim80Q3V061 Gm11779-201ENSMUST00000118541 368 ntBASIC15.12■□□□□ 0.01
Trim80Q3V061 Gm6736-201ENSMUST00000166583 948 ntBASIC15.12■□□□□ 0.01
Trim80Q3V061 Gm25745-201ENSMUST00000174945 133 ntBASIC15.12■□□□□ 0.01
Trim80Q3V061 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim80Q3V061 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim80Q3V061 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.12■□□□□ 0.01
Trim80Q3V061 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim80Q3V061 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trim80Q3V061 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.11■□□□□ 0.01
Trim80Q3V061 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Trim80Q3V061 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.11■□□□□ 0.01
Trim80Q3V061 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.11■□□□□ 0.01
Trim80Q3V061 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim80Q3V061 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Trim80Q3V061 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Trim80Q3V061 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim80Q3V061 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim80Q3V061 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim80Q3V061 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim80Q3V061 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim80Q3V061 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.1■□□□□ 0.01
Trim80Q3V061 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim80Q3V061 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.1■□□□□ 0.01
Trim80Q3V061 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim80Q3V061 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim80Q3V061 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim80Q3V061 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms