Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.68□□□□□ -0.38
Q3U1D9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Q3U1D9 Gm5566-201ENSMUST00000116118 459 ntBASIC12.68□□□□□ -0.38
Q3U1D9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Mir7684-201ENSMUST00000183858 60 ntBASIC12.68□□□□□ -0.38
Q3U1D9 Gm27306-201ENSMUST00000183970 107 ntBASIC12.68□□□□□ -0.38
Q3U1D9 Gm27321-201ENSMUST00000185021 205 ntBASIC12.68□□□□□ -0.38
Q3U1D9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.68□□□□□ -0.38
Q3U1D9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Q3U1D9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.68□□□□□ -0.38
Q3U1D9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Q3U1D9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Q3U1D9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.67□□□□□ -0.38
Q3U1D9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.67□□□□□ -0.38
Q3U1D9 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.67□□□□□ -0.38
Q3U1D9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3U1D9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3U1D9 Olfr286-202ENSMUST00000205305 969 ntBASIC12.67□□□□□ -0.38
Q3U1D9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.67□□□□□ -0.38
Q3U1D9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.67□□□□□ -0.38
Q3U1D9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.67□□□□□ -0.38
Q3U1D9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Q3U1D9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3U1D9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3U1D9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Q3U1D9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3U1D9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Q3U1D9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.66□□□□□ -0.38
Q3U1D9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.66□□□□□ -0.38
Q3U1D9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Q3U1D9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.66□□□□□ -0.38
Q3U1D9 Gm6222-201ENSMUST00000120787 396 ntBASIC12.66□□□□□ -0.38
Q3U1D9 Gm12151-201ENSMUST00000121374 290 ntBASIC12.66□□□□□ -0.38
Q3U1D9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.66□□□□□ -0.38
Q3U1D9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Q3U1D9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.66□□□□□ -0.38
Q3U1D9 Gm27533-201ENSMUST00000183800 152 ntBASIC12.66□□□□□ -0.38
Q3U1D9 Gm27989-201ENSMUST00000184721 107 ntBASIC12.66□□□□□ -0.38
Q3U1D9 Gm38294-201ENSMUST00000192831 381 ntBASIC12.66□□□□□ -0.38
Q3U1D9 Gm44344-201ENSMUST00000200287 129 ntBASIC12.66□□□□□ -0.38
Q3U1D9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Asic1-205ENSMUST00000228185 1818 ntBASIC12.66□□□□□ -0.38
Q3U1D9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Q3U1D9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Q3U1D9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Q3U1D9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms