Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Gm27628-201ENSMUST00000184911 107 ntBASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Cul4aQ3TCH7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.33■□□□□ 0.05
Cul4aQ3TCH7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Cul4aQ3TCH7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cul4aQ3TCH7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cul4aQ3TCH7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.33■□□□□ 0.05
Cul4aQ3TCH7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cul4aQ3TCH7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cul4aQ3TCH7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cul4aQ3TCH7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cul4aQ3TCH7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cul4aQ3TCH7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Cul4aQ3TCH7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cul4aQ3TCH7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cul4aQ3TCH7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cul4aQ3TCH7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cul4aQ3TCH7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cul4aQ3TCH7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms