Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ptchd3Q0EEE2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Gm25990-201ENSMUST00000102440 86 ntBASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Gm5864-201ENSMUST00000202263 970 ntBASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Rps4l-201ENSMUST00000071745 943 ntBASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptchd3Q0EEE2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Gm6089-201ENSMUST00000197666 938 ntBASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.11□□□□□ -0.15
Ptchd3Q0EEE2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms