Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.95□□□□□ -0.34
Chd8Q09XV5 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Gm11340-201ENSMUST00000119226 412 ntBASIC12.94□□□□□ -0.34
Chd8Q09XV5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Gm7857-201ENSMUST00000117957 358 ntBASIC12.94□□□□□ -0.34
Chd8Q09XV5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Gm44397-201ENSMUST00000195950 113 ntBASIC12.94□□□□□ -0.34
Chd8Q09XV5 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.94□□□□□ -0.34
Chd8Q09XV5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.94□□□□□ -0.34
Chd8Q09XV5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chd8Q09XV5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.94□□□□□ -0.34
Chd8Q09XV5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.93□□□□□ -0.34
Chd8Q09XV5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Gm4986-201ENSMUST00000119731 549 ntBASIC12.93□□□□□ -0.34
Chd8Q09XV5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Gm5425-201ENSMUST00000214125 459 ntBASIC12.93□□□□□ -0.34
Chd8Q09XV5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC12.93□□□□□ -0.34
Chd8Q09XV5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.92□□□□□ -0.34
Chd8Q09XV5 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.92□□□□□ -0.34
Chd8Q09XV5 Gm18905-201ENSMUST00000205454 928 ntBASIC12.92□□□□□ -0.34
Chd8Q09XV5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd8Q09XV5 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.91□□□□□ -0.34
Chd8Q09XV5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gm25880-201ENSMUST00000104331 132 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms