Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Gm4875-201ENSMUST00000118257 786 ntBASIC13.99□□□□□ -0.17
Hoxc4Q08624 Gm15957-201ENSMUST00000118893 974 ntBASIC13.99□□□□□ -0.17
Hoxc4Q08624 Gm15321-201ENSMUST00000121290 288 ntBASIC13.99□□□□□ -0.17
Hoxc4Q08624 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.99□□□□□ -0.17
Hoxc4Q08624 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.98□□□□□ -0.17
Hoxc4Q08624 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.98□□□□□ -0.17
Hoxc4Q08624 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc4Q08624 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Hoxc4Q08624 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Gm29667-201ENSMUST00000190817 490 ntBASIC13.97□□□□□ -0.17
Hoxc4Q08624 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Gm6916-202ENSMUST00000205523 195 ntBASIC13.97□□□□□ -0.17
Hoxc4Q08624 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.97□□□□□ -0.17
Hoxc4Q08624 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc4Q08624 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hoxc4Q08624 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms