Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Thbs3Q05895 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.82□□□□□ -0.36
Thbs3Q05895 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.82□□□□□ -0.36
Thbs3Q05895 Gm18057-201ENSMUST00000208220 503 ntBASIC12.82□□□□□ -0.36
Thbs3Q05895 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.82□□□□□ -0.36
Thbs3Q05895 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thbs3Q05895 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Gm4995-201ENSMUST00000117247 432 ntBASIC12.81□□□□□ -0.36
Thbs3Q05895 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.81□□□□□ -0.36
Thbs3Q05895 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.81□□□□□ -0.36
Thbs3Q05895 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Thbs3Q05895 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thbs3Q05895 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Thbs3Q05895 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Thbs3Q05895 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Thbs3Q05895 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.8□□□□□ -0.36
Thbs3Q05895 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.8□□□□□ -0.36
Thbs3Q05895 Gm24513-201ENSMUST00000174964 138 ntBASIC12.8□□□□□ -0.36
Thbs3Q05895 Gm27397-201ENSMUST00000184997 107 ntBASIC12.8□□□□□ -0.36
Thbs3Q05895 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.8□□□□□ -0.36
Thbs3Q05895 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.8□□□□□ -0.36
Thbs3Q05895 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.8□□□□□ -0.36
Thbs3Q05895 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms