Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.55□□□□□ -0.72
Hspg2Q05793 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.55□□□□□ -0.72
Hspg2Q05793 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Hspg2Q05793 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.55□□□□□ -0.72
Hspg2Q05793 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Hspg2Q05793 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.55□□□□□ -0.72
Hspg2Q05793 Mir7654-201ENSMUST00000185082 70 ntBASIC10.55□□□□□ -0.72
Hspg2Q05793 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.55□□□□□ -0.72
Hspg2Q05793 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Hspg2Q05793 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.55□□□□□ -0.72
Hspg2Q05793 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.55□□□□□ -0.72
Hspg2Q05793 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Hspg2Q05793 Gm3961-201ENSMUST00000204425 994 ntBASIC10.55□□□□□ -0.72
Hspg2Q05793 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hspg2Q05793 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.54□□□□□ -0.72
Hspg2Q05793 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Mir1894-201ENSMUST00000122802 81 ntBASIC10.54□□□□□ -0.72
Hspg2Q05793 Gm8652-201ENSMUST00000181363 964 ntBASIC10.54□□□□□ -0.72
Hspg2Q05793 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hspg2Q05793 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.54□□□□□ -0.72
Hspg2Q05793 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.54□□□□□ -0.72
Hspg2Q05793 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.54□□□□□ -0.72
Hspg2Q05793 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.54□□□□□ -0.72
Hspg2Q05793 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.54□□□□□ -0.72
Hspg2Q05793 Gm29199-201ENSMUST00000187766 775 ntBASIC10.54□□□□□ -0.72
Hspg2Q05793 Olfr286-202ENSMUST00000205305 969 ntBASIC10.54□□□□□ -0.72
Hspg2Q05793 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.54□□□□□ -0.72
Hspg2Q05793 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.54□□□□□ -0.72
Hspg2Q05793 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.54□□□□□ -0.72
Hspg2Q05793 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Gm7287-201ENSMUST00000205267 602 ntBASIC10.54□□□□□ -0.72
Hspg2Q05793 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.54□□□□□ -0.72
Hspg2Q05793 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hspg2Q05793 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC10.54□□□□□ -0.72
Hspg2Q05793 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Hspg2Q05793 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.53□□□□□ -0.72
Hspg2Q05793 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Hspg2Q05793 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.53□□□□□ -0.72
Hspg2Q05793 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.53□□□□□ -0.72
Hspg2Q05793 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Hspg2Q05793 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.53□□□□□ -0.72
Hspg2Q05793 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC10.53□□□□□ -0.72
Hspg2Q05793 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.53□□□□□ -0.72
Hspg2Q05793 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.53□□□□□ -0.72
Hspg2Q05793 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.53□□□□□ -0.72
Hspg2Q05793 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.53□□□□□ -0.72
Hspg2Q05793 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hspg2Q05793 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.53□□□□□ -0.72
Hspg2Q05793 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hspg2Q05793 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.52□□□□□ -0.72
Hspg2Q05793 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hspg2Q05793 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hspg2Q05793 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hspg2Q05793 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms