Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Apoa1Q00623 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Apoa1Q00623 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Apoa1Q00623 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Apoa1Q00623 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Apoa1Q00623 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Apoa1Q00623 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.83□□□□□ -0.2
Apoa1Q00623 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.83□□□□□ -0.2
Apoa1Q00623 Gm17807-201ENSMUST00000186869 298 ntBASIC13.83□□□□□ -0.2
Apoa1Q00623 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.83□□□□□ -0.2
Apoa1Q00623 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Apoa1Q00623 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Gm13418-201ENSMUST00000119097 944 ntBASIC13.82□□□□□ -0.2
Apoa1Q00623 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.82□□□□□ -0.2
Apoa1Q00623 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Apoa1Q00623 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.82□□□□□ -0.2
Apoa1Q00623 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Apoa1Q00623 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Apoa1Q00623 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Apoa1Q00623 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Apoa1Q00623 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.81□□□□□ -0.2
Apoa1Q00623 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Apoa1Q00623 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.81□□□□□ -0.2
Apoa1Q00623 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.81□□□□□ -0.2
Apoa1Q00623 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Apoa1Q00623 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Gm6089-201ENSMUST00000197666 938 ntBASIC13.81□□□□□ -0.2
Apoa1Q00623 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.81□□□□□ -0.2
Apoa1Q00623 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Apoa1Q00623 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.81□□□□□ -0.2
Apoa1Q00623 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Apoa1Q00623 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Apoa1Q00623 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Apoa1Q00623 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms