Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Celf4-206ENSMUST00000224553 1729 ntBASIC13.82□□□□□ -0.2
Nkx3-2P97503 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.82□□□□□ -0.2
Nkx3-2P97503 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Gm15693-201ENSMUST00000120470 637 ntBASIC13.82□□□□□ -0.2
Nkx3-2P97503 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Nkx3-2P97503 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Nkx3-2P97503 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Gm24158-201ENSMUST00000175263 71 ntBASIC13.82□□□□□ -0.2
Nkx3-2P97503 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.82□□□□□ -0.2
Nkx3-2P97503 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.82□□□□□ -0.2
Nkx3-2P97503 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.82□□□□□ -0.2
Nkx3-2P97503 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.82□□□□□ -0.2
Nkx3-2P97503 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.82□□□□□ -0.2
Nkx3-2P97503 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx3-2P97503 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-2P97503 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.81□□□□□ -0.2
Nkx3-2P97503 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Gm27430-201ENSMUST00000184585 107 ntBASIC13.81□□□□□ -0.2
Nkx3-2P97503 Gm44333-201ENSMUST00000197168 107 ntBASIC13.81□□□□□ -0.2
Nkx3-2P97503 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.81□□□□□ -0.2
Nkx3-2P97503 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-2P97503 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 AA543401-201ENSMUST00000164248 1269 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms