Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm6222-202ENSMUST00000182143 629 ntBASIC9.75□□□□□ -0.85
PrkdcP97313 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.75□□□□□ -0.85
PrkdcP97313 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Selenot-ps-201ENSMUST00000119098 593 ntBASIC9.75□□□□□ -0.85
PrkdcP97313 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC9.75□□□□□ -0.85
PrkdcP97313 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC9.74□□□□□ -0.85
PrkdcP97313 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.74□□□□□ -0.85
PrkdcP97313 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.74□□□□□ -0.85
PrkdcP97313 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.74□□□□□ -0.85
PrkdcP97313 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
PrkdcP97313 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC9.74□□□□□ -0.85
PrkdcP97313 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Gm42901-201ENSMUST00000197735 3171 ntBASIC9.74□□□□□ -0.85
PrkdcP97313 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
PrkdcP97313 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC9.74□□□□□ -0.85
PrkdcP97313 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.74□□□□□ -0.85
PrkdcP97313 Gm25927-201ENSMUST00000175058 117 ntBASIC9.74□□□□□ -0.85
PrkdcP97313 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
PrkdcP97313 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.74□□□□□ -0.85
PrkdcP97313 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PrkdcP97313 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.73□□□□□ -0.85
PrkdcP97313 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Gm5687-201ENSMUST00000118252 640 ntBASIC9.73□□□□□ -0.85
PrkdcP97313 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC9.73□□□□□ -0.85
PrkdcP97313 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Gm6944-201ENSMUST00000182449 1006 ntBASIC9.73□□□□□ -0.85
PrkdcP97313 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
PrkdcP97313 Prob1-201ENSMUST00000097619 3021 ntBASIC9.73□□□□□ -0.85
PrkdcP97313 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC9.73□□□□□ -0.85
PrkdcP97313 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
PrkdcP97313 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.73□□□□□ -0.85
PrkdcP97313 Gm7467-201ENSMUST00000185173 652 ntBASIC9.73□□□□□ -0.85
PrkdcP97313 Gm3508-201ENSMUST00000186012 792 ntBASIC9.73□□□□□ -0.85
PrkdcP97313 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
PrkdcP97313 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
PrkdcP97313 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
PrkdcP97313 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.73□□□□□ -0.85
PrkdcP97313 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.73□□□□□ -0.85
PrkdcP97313 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
PrkdcP97313 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
PrkdcP97313 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms