Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.88■□□□□ 0.13
Trim43cP86449 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.88■□□□□ 0.13
Trim43cP86449 Gm2810-201ENSMUST00000118681 990 ntBASIC15.88■□□□□ 0.13
Trim43cP86449 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trim43cP86449 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim43cP86449 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trim43cP86449 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim43cP86449 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Trim43cP86449 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim43cP86449 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim43cP86449 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Gm27494-201ENSMUST00000184735 189 ntBASIC15.87■□□□□ 0.13
Trim43cP86449 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim43cP86449 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.87■□□□□ 0.13
Trim43cP86449 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trim43cP86449 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.87■□□□□ 0.13
Trim43cP86449 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trim43cP86449 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trim43cP86449 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43cP86449 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.86■□□□□ 0.13
Trim43cP86449 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim43cP86449 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.86■□□□□ 0.13
Trim43cP86449 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.86■□□□□ 0.13
Trim43cP86449 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim43cP86449 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.86■□□□□ 0.13
Trim43cP86449 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.86■□□□□ 0.13
Trim43cP86449 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim43cP86449 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.86■□□□□ 0.13
Trim43cP86449 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim43cP86449 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim43cP86449 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim43cP86449 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.86■□□□□ 0.13
Trim43cP86449 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim43cP86449 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim43cP86449 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.86■□□□□ 0.13
Trim43cP86449 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim43cP86449 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim43cP86449 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.86■□□□□ 0.13
Trim43cP86449 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43cP86449 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim43cP86449 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim43cP86449 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim43cP86449 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
Trim43cP86449 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.85■□□□□ 0.13
Trim43cP86449 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim43cP86449 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.85■□□□□ 0.13
Trim43cP86449 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.85■□□□□ 0.13
Trim43cP86449 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms