Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.26□□□□□ -0.45
SgcaP82350 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.26□□□□□ -0.45
SgcaP82350 Gm9013-201ENSMUST00000132939 882 ntBASIC12.26□□□□□ -0.45
SgcaP82350 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.26□□□□□ -0.45
SgcaP82350 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.26□□□□□ -0.45
SgcaP82350 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.26□□□□□ -0.45
SgcaP82350 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SgcaP82350 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.26□□□□□ -0.45
SgcaP82350 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SgcaP82350 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.25□□□□□ -0.45
SgcaP82350 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SgcaP82350 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SgcaP82350 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SgcaP82350 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SgcaP82350 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Gm13312-201ENSMUST00000119631 718 ntBASIC12.25□□□□□ -0.45
SgcaP82350 Gm8344-201ENSMUST00000119813 856 ntBASIC12.25□□□□□ -0.45
SgcaP82350 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.25□□□□□ -0.45
SgcaP82350 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.25□□□□□ -0.45
SgcaP82350 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.25□□□□□ -0.45
SgcaP82350 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
SgcaP82350 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcaP82350 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.25□□□□□ -0.45
SgcaP82350 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
SgcaP82350 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.24□□□□□ -0.45
SgcaP82350 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SgcaP82350 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.24□□□□□ -0.45
SgcaP82350 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SgcaP82350 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.24□□□□□ -0.45
SgcaP82350 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.24□□□□□ -0.45
SgcaP82350 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SgcaP82350 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.24□□□□□ -0.45
SgcaP82350 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.24□□□□□ -0.45
SgcaP82350 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.24□□□□□ -0.45
SgcaP82350 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms