Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SgcbP82349 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.03□□□□□ -0.32
SgcbP82349 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.02□□□□□ -0.32
SgcbP82349 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcbP82349 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SgcbP82349 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SgcbP82349 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SgcbP82349 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SgcbP82349 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcbP82349 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcbP82349 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
SgcbP82349 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SgcbP82349 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcbP82349 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcbP82349 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SgcbP82349 Gm13464-201ENSMUST00000119418 935 ntBASIC13.02□□□□□ -0.33
SgcbP82349 Gm9726-201ENSMUST00000180321 678 ntBASIC13.02□□□□□ -0.33
SgcbP82349 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SgcbP82349 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.02□□□□□ -0.33
SgcbP82349 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SgcbP82349 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SgcbP82349 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcbP82349 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.01□□□□□ -0.33
SgcbP82349 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SgcbP82349 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.01□□□□□ -0.33
SgcbP82349 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.01□□□□□ -0.33
SgcbP82349 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SgcbP82349 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.01□□□□□ -0.33
SgcbP82349 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.01□□□□□ -0.33
SgcbP82349 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.01□□□□□ -0.33
SgcbP82349 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.01□□□□□ -0.33
SgcbP82349 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
SgcbP82349 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.01□□□□□ -0.33
SgcbP82349 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.01□□□□□ -0.33
SgcbP82349 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SgcbP82349 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.01□□□□□ -0.33
SgcbP82349 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.01□□□□□ -0.33
SgcbP82349 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SgcbP82349 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SgcbP82349 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SgcbP82349 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SgcbP82349 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcbP82349 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SgcbP82349 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SgcbP82349 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SgcbP82349 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SgcbP82349 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SgcbP82349 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SgcbP82349 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Gm42934-201ENSMUST00000196920 1345 ntBASIC13□□□□□ -0.33
SgcbP82349 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13□□□□□ -0.33
SgcbP82349 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13□□□□□ -0.33
SgcbP82349 Gm24158-201ENSMUST00000175263 71 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms