Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Shox2P70390 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Shox2P70390 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.43□□□□□ -0.1
Shox2P70390 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Shox2P70390 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.42□□□□□ -0.1
Shox2P70390 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Gm8584-201ENSMUST00000171982 758 ntBASIC14.42□□□□□ -0.1
Shox2P70390 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.42□□□□□ -0.1
Shox2P70390 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.42□□□□□ -0.1
Shox2P70390 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.42□□□□□ -0.1
Shox2P70390 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.42□□□□□ -0.1
Shox2P70390 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Shox2P70390 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Shox2P70390 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.42□□□□□ -0.1
Shox2P70390 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Shox2P70390 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Shox2P70390 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shox2P70390 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Shox2P70390 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Shox2P70390 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.41□□□□□ -0.1
Shox2P70390 Gm12497-201ENSMUST00000138778 237 ntBASIC14.41□□□□□ -0.1
Shox2P70390 Gm6623-201ENSMUST00000173570 544 ntBASIC14.41□□□□□ -0.1
Shox2P70390 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.41□□□□□ -0.1
Shox2P70390 Gm22697-201ENSMUST00000175194 63 ntBASIC14.41□□□□□ -0.1
Shox2P70390 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Gm9726-201ENSMUST00000180321 678 ntBASIC14.41□□□□□ -0.1
Shox2P70390 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.41□□□□□ -0.1
Shox2P70390 Gm44454-201ENSMUST00000198541 138 ntBASIC14.41□□□□□ -0.1
Shox2P70390 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.41□□□□□ -0.1
Shox2P70390 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Shox2P70390 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shox2P70390 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Shox2P70390 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Shox2P70390 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Shox2P70390 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.4□□□□□ -0.1
Shox2P70390 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Shox2P70390 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.4□□□□□ -0.1
Shox2P70390 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Shox2P70390 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Shox2P70390 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.4□□□□□ -0.1
Shox2P70390 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms