Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC20.18■□□□□ 0.82
Stra8P70278 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Stra8P70278 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.18■□□□□ 0.82
Stra8P70278 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Stra8P70278 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.17■□□□□ 0.82
Stra8P70278 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC20.17■□□□□ 0.82
Stra8P70278 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.17■□□□□ 0.82
Stra8P70278 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.17■□□□□ 0.82
Stra8P70278 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.17■□□□□ 0.82
Stra8P70278 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.17■□□□□ 0.82
Stra8P70278 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Stra8P70278 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC20.17■□□□□ 0.82
Stra8P70278 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Stra8P70278 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.16■□□□□ 0.82
Stra8P70278 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Stra8P70278 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Stra8P70278 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Stra8P70278 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Stra8P70278 Gm18733-201ENSMUST00000173950 856 ntBASIC20.16■□□□□ 0.82
Stra8P70278 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 AV026068-213ENSMUST00000223675 1171 ntBASIC20.16■□□□□ 0.82
Stra8P70278 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Stra8P70278 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.16■□□□□ 0.82
Stra8P70278 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC20.16■□□□□ 0.82
Stra8P70278 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Stra8P70278 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC20.16■□□□□ 0.82
Stra8P70278 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Stra8P70278 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Stra8P70278 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Stra8P70278 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stra8P70278 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stra8P70278 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stra8P70278 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC20.15■□□□□ 0.82
Stra8P70278 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Stra8P70278 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stra8P70278 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.15■□□□□ 0.82
Stra8P70278 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.15■□□□□ 0.82
Stra8P70278 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.15■□□□□ 0.82
Stra8P70278 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.15■□□□□ 0.82
Stra8P70278 Gm37153-201ENSMUST00000193637 231 ntBASIC20.15■□□□□ 0.82
Stra8P70278 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.15■□□□□ 0.82
Stra8P70278 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.15■□□□□ 0.82
Stra8P70278 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stra8P70278 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Stra8P70278 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Stra8P70278 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stra8P70278 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stra8P70278 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stra8P70278 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Stra8P70278 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Stra8P70278 AC159649.2-201ENSMUST00000222984 3223 ntBASIC20.14■□□□□ 0.82
Stra8P70278 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Stra8P70278 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Stra8P70278 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.14■□□□□ 0.81
Stra8P70278 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Stra8P70278 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms