Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Lsm5P62322 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Gm8318-201ENSMUST00000182954 872 ntBASIC12.18□□□□□ -0.46
Lsm5P62322 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.18□□□□□ -0.46
Lsm5P62322 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.18□□□□□ -0.46
Lsm5P62322 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm5P62322 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lsm5P62322 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Lsm5P62322 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Lsm5P62322 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm5P62322 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lsm5P62322 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm5P62322 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm5P62322 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.17□□□□□ -0.46
Lsm5P62322 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lsm5P62322 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.17□□□□□ -0.46
Lsm5P62322 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.17□□□□□ -0.46
Lsm5P62322 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.17□□□□□ -0.46
Lsm5P62322 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm5P62322 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Lsm5P62322 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm5P62322 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm5P62322 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.17□□□□□ -0.46
Lsm5P62322 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm5P62322 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.16□□□□□ -0.46
Lsm5P62322 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lsm5P62322 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.16□□□□□ -0.46
Lsm5P62322 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.16□□□□□ -0.46
Lsm5P62322 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lsm5P62322 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.16□□□□□ -0.46
Lsm5P62322 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.16□□□□□ -0.46
Lsm5P62322 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.16□□□□□ -0.46
Lsm5P62322 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lsm5P62322 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lsm5P62322 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm5P62322 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm5P62322 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm5P62322 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm5P62322 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.15□□□□□ -0.46
Lsm5P62322 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm5P62322 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm5P62322 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm5P62322 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm5P62322 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms