Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Gm8344-201ENSMUST00000119813 856 ntBASIC12.89□□□□□ -0.35
Sec61a1P61620 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Sec61a1P61620 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.89□□□□□ -0.35
Sec61a1P61620 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.89□□□□□ -0.35
Sec61a1P61620 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.89□□□□□ -0.35
Sec61a1P61620 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.89□□□□□ -0.35
Sec61a1P61620 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Sec61a1P61620 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.89□□□□□ -0.35
Sec61a1P61620 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sec61a1P61620 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sec61a1P61620 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.88□□□□□ -0.35
Sec61a1P61620 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.88□□□□□ -0.35
Sec61a1P61620 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Gm14722-201ENSMUST00000118943 689 ntBASIC12.88□□□□□ -0.35
Sec61a1P61620 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.88□□□□□ -0.35
Sec61a1P61620 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.88□□□□□ -0.35
Sec61a1P61620 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Gm23547-201ENSMUST00000158210 271 ntBASIC12.88□□□□□ -0.35
Sec61a1P61620 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.88□□□□□ -0.35
Sec61a1P61620 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.88□□□□□ -0.35
Sec61a1P61620 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.88□□□□□ -0.35
Sec61a1P61620 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sec61a1P61620 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sec61a1P61620 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61a1P61620 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.87□□□□□ -0.35
Sec61a1P61620 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms