Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube2d3P61079 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ube2d3P61079 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube2d3P61079 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube2d3P61079 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Ube2d3P61079 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube2d3P61079 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube2d3P61079 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ube2d3P61079 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube2d3P61079 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ube2d3P61079 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ube2d3P61079 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.47□□□□□ -0.73
Ube2d3P61079 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Gm9103-201ENSMUST00000119371 405 ntBASIC10.47□□□□□ -0.73
Ube2d3P61079 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Gm23547-201ENSMUST00000158210 271 ntBASIC10.47□□□□□ -0.73
Ube2d3P61079 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.47□□□□□ -0.73
Ube2d3P61079 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.47□□□□□ -0.73
Ube2d3P61079 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.47□□□□□ -0.73
Ube2d3P61079 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.47□□□□□ -0.73
Ube2d3P61079 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ube2d3P61079 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube2d3P61079 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Ube2d3P61079 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube2d3P61079 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.46□□□□□ -0.73
Ube2d3P61079 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube2d3P61079 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ube2d3P61079 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube2d3P61079 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube2d3P61079 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube2d3P61079 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ube2d3P61079 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube2d3P61079 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube2d3P61079 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ube2d3P61079 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.46□□□□□ -0.73
Ube2d3P61079 Gm7230-201ENSMUST00000173026 815 ntBASIC10.46□□□□□ -0.73
Ube2d3P61079 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.46□□□□□ -0.73
Ube2d3P61079 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube2d3P61079 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Ube2d3P61079 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Ube2d3P61079 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.46□□□□□ -0.74
Ube2d3P61079 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.46□□□□□ -0.74
Ube2d3P61079 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube2d3P61079 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
Ube2d3P61079 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 Matn2-206ENSMUST00000228570 2798 ntBASIC10.45□□□□□ -0.74
Ube2d3P61079 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.45□□□□□ -0.74
Ube2d3P61079 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube2d3P61079 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ube2d3P61079 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms