Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm5354-201ENSMUST00000182417 973 ntBASIC19.61■□□□□ 0.73
Nphp4P59240 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nphp4P59240 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC19.61■□□□□ 0.73
Nphp4P59240 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.61■□□□□ 0.73
Nphp4P59240 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nphp4P59240 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nphp4P59240 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nphp4P59240 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nphp4P59240 Gm42690-201ENSMUST00000197921 1836 ntBASIC19.61■□□□□ 0.73
Nphp4P59240 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nphp4P59240 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nphp4P59240 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC19.61■□□□□ 0.73
Nphp4P59240 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nphp4P59240 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nphp4P59240 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nphp4P59240 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Nphp4P59240 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nphp4P59240 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nphp4P59240 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Nphp4P59240 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Ighv5-13-201ENSMUST00000193550 290 ntBASIC19.6■□□□□ 0.73
Nphp4P59240 Gm5279-201ENSMUST00000199575 745 ntBASIC19.6■□□□□ 0.73
Nphp4P59240 Gm18027-201ENSMUST00000218947 619 ntBASIC19.6■□□□□ 0.73
Nphp4P59240 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC19.6■□□□□ 0.73
Nphp4P59240 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nphp4P59240 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nphp4P59240 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC19.59■□□□□ 0.73
Nphp4P59240 AC162801.1-201ENSMUST00000220612 198 ntBASIC19.59■□□□□ 0.73
Nphp4P59240 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Nphp4P59240 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nphp4P59240 Gm7558-201ENSMUST00000193221 1165 ntBASIC19.59■□□□□ 0.73
Nphp4P59240 Gm9908-201ENSMUST00000211534 448 ntBASIC19.59■□□□□ 0.73
Nphp4P59240 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Nphp4P59240 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Nphp4P59240 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nphp4P59240 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nphp4P59240 AC166574.6-201ENSMUST00000227889 1806 ntBASIC19.58■□□□□ 0.73
Nphp4P59240 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nphp4P59240 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nphp4P59240 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nphp4P59240 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nphp4P59240 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nphp4P59240 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Nphp4P59240 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
Nphp4P59240 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Nphp4P59240 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Nphp4P59240 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Gm12091-201ENSMUST00000146791 830 ntBASIC19.58■□□□□ 0.72
Nphp4P59240 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Gm45384-201ENSMUST00000210451 277 ntBASIC19.58■□□□□ 0.72
Nphp4P59240 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.58■□□□□ 0.72
Nphp4P59240 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC19.58■□□□□ 0.72
Nphp4P59240 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nphp4P59240 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Gm9115-201ENSMUST00000120192 1348 ntBASIC19.57■□□□□ 0.72
Nphp4P59240 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nphp4P59240 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms