Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Tpm1P58771 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tpm1P58771 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm1P58771 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.31■□□□□ 0.2
Tpm1P58771 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Tpm1P58771 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.31■□□□□ 0.2
Tpm1P58771 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.31■□□□□ 0.2
Tpm1P58771 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tpm1P58771 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Tpm1P58771 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Tpm1P58771 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm1P58771 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.3■□□□□ 0.2
Tpm1P58771 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.3■□□□□ 0.2
Tpm1P58771 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tpm1P58771 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Tpm1P58771 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Tpm1P58771 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm1P58771 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tpm1P58771 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.29■□□□□ 0.2
Tpm1P58771 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tpm1P58771 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.29■□□□□ 0.2
Tpm1P58771 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.29■□□□□ 0.2
Tpm1P58771 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Tpm1P58771 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tpm1P58771 Gm27704-201ENSMUST00000185094 107 ntBASIC16.29■□□□□ 0.2
Tpm1P58771 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tpm1P58771 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tpm1P58771 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm1P58771 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tpm1P58771 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.28■□□□□ 0.2
Tpm1P58771 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
Tpm1P58771 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.28■□□□□ 0.2
Tpm1P58771 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.28■□□□□ 0.2
Tpm1P58771 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.28■□□□□ 0.2
Tpm1P58771 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms