Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.9■□□□□ 0.46
Tm6sf1P58749 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tm6sf1P58749 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tm6sf1P58749 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tm6sf1P58749 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tm6sf1P58749 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tm6sf1P58749 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Tm6sf1P58749 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.89■□□□□ 0.45
Tm6sf1P58749 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Tm6sf1P58749 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tm6sf1P58749 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Gm18049-201ENSMUST00000208909 581 ntBASIC17.88■□□□□ 0.45
Tm6sf1P58749 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Gm8396-201ENSMUST00000057361 823 ntBASIC17.88■□□□□ 0.45
Tm6sf1P58749 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Tm6sf1P58749 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.87■□□□□ 0.45
Tm6sf1P58749 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Gm13823-201ENSMUST00000119930 345 ntBASIC17.87■□□□□ 0.45
Tm6sf1P58749 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Gm18766-201ENSMUST00000189811 808 ntBASIC17.87■□□□□ 0.45
Tm6sf1P58749 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tm6sf1P58749 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tm6sf1P58749 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Tm6sf1P58749 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tm6sf1P58749 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tm6sf1P58749 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tm6sf1P58749 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tm6sf1P58749 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tm6sf1P58749 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tm6sf1P58749 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tm6sf1P58749 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms