Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.82□□□□□ -0.52
Sssca1P56873 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sssca1P56873 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sssca1P56873 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Gm4535-201ENSMUST00000182274 558 ntBASIC11.82□□□□□ -0.52
Sssca1P56873 Mir7071-201ENSMUST00000184847 69 ntBASIC11.82□□□□□ -0.52
Sssca1P56873 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sssca1P56873 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.82□□□□□ -0.52
Sssca1P56873 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Sssca1P56873 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.82□□□□□ -0.52
Sssca1P56873 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sssca1P56873 Gm10355-201ENSMUST00000097146 517 ntBASIC11.82□□□□□ -0.52
Sssca1P56873 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.82□□□□□ -0.52
Sssca1P56873 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sssca1P56873 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sssca1P56873 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.81□□□□□ -0.52
Sssca1P56873 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.81□□□□□ -0.52
Sssca1P56873 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sssca1P56873 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sssca1P56873 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sssca1P56873 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.81□□□□□ -0.52
Sssca1P56873 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Sssca1P56873 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.81□□□□□ -0.52
Sssca1P56873 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.81□□□□□ -0.52
Sssca1P56873 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.81□□□□□ -0.52
Sssca1P56873 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.81□□□□□ -0.52
Sssca1P56873 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.81□□□□□ -0.52
Sssca1P56873 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Sssca1P56873 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sssca1P56873 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sssca1P56873 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sssca1P56873 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.81□□□□□ -0.52
Sssca1P56873 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sssca1P56873 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sssca1P56873 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Sssca1P56873 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.81□□□□□ -0.52
Sssca1P56873 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sssca1P56873 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.81□□□□□ -0.52
Sssca1P56873 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sssca1P56873 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sssca1P56873 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Sssca1P56873 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Sssca1P56873 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sssca1P56873 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.8□□□□□ -0.52
Sssca1P56873 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Sssca1P56873 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.8□□□□□ -0.52
Sssca1P56873 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.8□□□□□ -0.52
Sssca1P56873 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms