Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Nub1P54729 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nub1P54729 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.71■□□□□ 0.11
Nub1P54729 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Nub1P54729 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Nub1P54729 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Gm6973-201ENSMUST00000117080 721 ntBASIC15.71■□□□□ 0.11
Nub1P54729 Gm11745-201ENSMUST00000121669 448 ntBASIC15.71■□□□□ 0.11
Nub1P54729 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.71■□□□□ 0.11
Nub1P54729 Gm24513-201ENSMUST00000174964 138 ntBASIC15.71■□□□□ 0.11
Nub1P54729 Gm27397-201ENSMUST00000184997 107 ntBASIC15.71■□□□□ 0.11
Nub1P54729 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.71■□□□□ 0.11
Nub1P54729 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Nub1P54729 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nub1P54729 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nub1P54729 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nub1P54729 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Nub1P54729 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nub1P54729 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.71■□□□□ 0.1
Nub1P54729 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Nub1P54729 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Nub1P54729 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Nub1P54729 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nub1P54729 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.7■□□□□ 0.1
Nub1P54729 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Nub1P54729 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Nub1P54729 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.7■□□□□ 0.1
Nub1P54729 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.7■□□□□ 0.1
Nub1P54729 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Nub1P54729 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Nub1P54729 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Nub1P54729 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Nub1P54729 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.7■□□□□ 0.1
Nub1P54729 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.7■□□□□ 0.1
Nub1P54729 Gm37935-201ENSMUST00000192012 982 ntBASIC15.7■□□□□ 0.1
Nub1P54729 Gm2451-201ENSMUST00000199447 999 ntBASIC15.7■□□□□ 0.1
Nub1P54729 Gm10290-201ENSMUST00000200451 999 ntBASIC15.7■□□□□ 0.1
Nub1P54729 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.7■□□□□ 0.1
Nub1P54729 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.7■□□□□ 0.1
Nub1P54729 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nub1P54729 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nub1P54729 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nub1P54729 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nub1P54729 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.69■□□□□ 0.1
Nub1P54729 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nub1P54729 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.69■□□□□ 0.1
Nub1P54729 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nub1P54729 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.69■□□□□ 0.1
Nub1P54729 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Nub1P54729 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.69■□□□□ 0.1
Nub1P54729 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Gm27494-201ENSMUST00000184735 189 ntBASIC15.69■□□□□ 0.1
Nub1P54729 Gm2213-201ENSMUST00000197485 688 ntBASIC15.69■□□□□ 0.1
Nub1P54729 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.69■□□□□ 0.1
Nub1P54729 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms