Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.61□□□□□ -0.07
Fdft1P53798 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Fdft1P53798 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Fdft1P53798 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.6□□□□□ -0.07
Fdft1P53798 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Carlr-201ENSMUST00000181515 2574 ntBASIC14.6□□□□□ -0.07
Fdft1P53798 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Gm12008-201ENSMUST00000117791 755 ntBASIC14.6□□□□□ -0.07
Fdft1P53798 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.6□□□□□ -0.07
Fdft1P53798 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Fdft1P53798 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.6□□□□□ -0.07
Fdft1P53798 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Fdft1P53798 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Fdft1P53798 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fdft1P53798 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.59□□□□□ -0.07
Fdft1P53798 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.59□□□□□ -0.07
Fdft1P53798 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Fdft1P53798 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.59□□□□□ -0.07
Fdft1P53798 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.59□□□□□ -0.07
Fdft1P53798 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Fdft1P53798 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.59□□□□□ -0.07
Fdft1P53798 Gm13597-201ENSMUST00000121239 375 ntBASIC14.59□□□□□ -0.07
Fdft1P53798 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.59□□□□□ -0.07
Fdft1P53798 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.59□□□□□ -0.07
Fdft1P53798 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.59□□□□□ -0.07
Fdft1P53798 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.59□□□□□ -0.07
Fdft1P53798 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.59□□□□□ -0.07
Fdft1P53798 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
Fdft1P53798 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Fdft1P53798 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Fdft1P53798 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Fdft1P53798 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Fdft1P53798 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fdft1P53798 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.58□□□□□ -0.07
Fdft1P53798 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Fdft1P53798 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Fdft1P53798 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Fdft1P53798 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Fdft1P53798 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Fdft1P53798 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Fdft1P53798 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Fdft1P53798 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.58□□□□□ -0.08
Fdft1P53798 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.58□□□□□ -0.08
Fdft1P53798 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms