Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lbx1P52955 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.08□□□□□ -0.16
Lbx1P52955 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.08□□□□□ -0.16
Lbx1P52955 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lbx1P52955 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lbx1P52955 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.07□□□□□ -0.16
Lbx1P52955 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lbx1P52955 Gm8805-201ENSMUST00000117848 313 ntBASIC14.07□□□□□ -0.16
Lbx1P52955 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.07□□□□□ -0.16
Lbx1P52955 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.07□□□□□ -0.16
Lbx1P52955 B9d1os-201ENSMUST00000137010 674 ntBASIC14.07□□□□□ -0.16
Lbx1P52955 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.07□□□□□ -0.16
Lbx1P52955 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.07□□□□□ -0.16
Lbx1P52955 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.07□□□□□ -0.16
Lbx1P52955 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.07□□□□□ -0.16
Lbx1P52955 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.07□□□□□ -0.16
Lbx1P52955 Cts7-204ENSMUST00000225321 1257 ntBASIC14.07□□□□□ -0.16
Lbx1P52955 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Lbx1P52955 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lbx1P52955 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lbx1P52955 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.07□□□□□ -0.16
Lbx1P52955 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Lbx1P52955 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lbx1P52955 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lbx1P52955 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lbx1P52955 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.06□□□□□ -0.16
Lbx1P52955 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Lbx1P52955 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lbx1P52955 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.06□□□□□ -0.16
Lbx1P52955 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.06□□□□□ -0.16
Lbx1P52955 Gm27320-201ENSMUST00000184892 109 ntBASIC14.06□□□□□ -0.16
Lbx1P52955 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Lbx1P52955 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.06□□□□□ -0.16
Lbx1P52955 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.06□□□□□ -0.16
Lbx1P52955 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lbx1P52955 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lbx1P52955 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.05□□□□□ -0.16
Lbx1P52955 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lbx1P52955 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 Gm15393-201ENSMUST00000120499 219 ntBASIC14.05□□□□□ -0.16
Lbx1P52955 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.05□□□□□ -0.16
Lbx1P52955 Gm43947-201ENSMUST00000203019 959 ntBASIC14.05□□□□□ -0.16
Lbx1P52955 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.05□□□□□ -0.16
Lbx1P52955 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lbx1P52955 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lbx1P52955 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.04□□□□□ -0.16
Lbx1P52955 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms