Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Ercc3P49135 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.35■□□□□ 0.37
Ercc3P49135 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.35■□□□□ 0.37
Ercc3P49135 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Ercc3P49135 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc3P49135 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ercc3P49135 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ercc3P49135 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ercc3P49135 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc3P49135 Gm14701-201ENSMUST00000117156 348 ntBASIC17.34■□□□□ 0.37
Ercc3P49135 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.34■□□□□ 0.37
Ercc3P49135 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.34■□□□□ 0.37
Ercc3P49135 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc3P49135 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc3P49135 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.34■□□□□ 0.37
Ercc3P49135 Gm2451-201ENSMUST00000199447 999 ntBASIC17.34■□□□□ 0.37
Ercc3P49135 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.34■□□□□ 0.37
Ercc3P49135 Gm10290-201ENSMUST00000200451 999 ntBASIC17.34■□□□□ 0.37
Ercc3P49135 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ercc3P49135 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.34■□□□□ 0.37
Ercc3P49135 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc3P49135 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc3P49135 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc3P49135 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc3P49135 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ercc3P49135 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ercc3P49135 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Ercc3P49135 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.34■□□□□ 0.37
Ercc3P49135 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.37
Ercc3P49135 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ercc3P49135 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ercc3P49135 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ercc3P49135 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ercc3P49135 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ercc3P49135 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ercc3P49135 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc3P49135 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc3P49135 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc3P49135 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Ercc3P49135 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.33■□□□□ 0.36
Ercc3P49135 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.33■□□□□ 0.36
Ercc3P49135 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc3P49135 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.33■□□□□ 0.36
Ercc3P49135 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc3P49135 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc3P49135 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc3P49135 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc3P49135 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Ercc3P49135 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.32■□□□□ 0.36
Ercc3P49135 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ercc3P49135 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.32■□□□□ 0.36
Ercc3P49135 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
Ercc3P49135 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ercc3P49135 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Ercc3P49135 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ercc3P49135 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc3P49135 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.31■□□□□ 0.36
Ercc3P49135 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ercc3P49135 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.31■□□□□ 0.36
Ercc3P49135 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ercc3P49135 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ercc3P49135 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Ercc3P49135 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.31■□□□□ 0.36
Ercc3P49135 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.31■□□□□ 0.36
Ercc3P49135 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.31■□□□□ 0.36
Ercc3P49135 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Ercc3P49135 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.31■□□□□ 0.36
Ercc3P49135 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ercc3P49135 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms