Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.13■□□□□ 0.17
Brca1P48754 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Brca1P48754 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.13■□□□□ 0.17
Brca1P48754 Gm37714-201ENSMUST00000194742 342 ntBASIC16.13■□□□□ 0.17
Brca1P48754 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.13■□□□□ 0.17
Brca1P48754 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.13■□□□□ 0.17
Brca1P48754 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Brca1P48754 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Brca1P48754 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.13■□□□□ 0.17
Brca1P48754 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.13■□□□□ 0.17
Brca1P48754 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Brca1P48754 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.12■□□□□ 0.17
Brca1P48754 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.12■□□□□ 0.17
Brca1P48754 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.12■□□□□ 0.17
Brca1P48754 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.12■□□□□ 0.17
Brca1P48754 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.12■□□□□ 0.17
Brca1P48754 Gm5370-201ENSMUST00000187187 574 ntBASIC16.12■□□□□ 0.17
Brca1P48754 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.12■□□□□ 0.17
Brca1P48754 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Brca1P48754 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.12■□□□□ 0.17
Brca1P48754 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.12■□□□□ 0.17
Brca1P48754 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Brca1P48754 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.12■□□□□ 0.17
Brca1P48754 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.12■□□□□ 0.17
Brca1P48754 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.12■□□□□ 0.17
Brca1P48754 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.12■□□□□ 0.17
Brca1P48754 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.12■□□□□ 0.17
Brca1P48754 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.12■□□□□ 0.17
Brca1P48754 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.12■□□□□ 0.17
Brca1P48754 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Brca1P48754 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.12■□□□□ 0.17
Brca1P48754 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.12■□□□□ 0.17
Brca1P48754 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.11■□□□□ 0.17
Brca1P48754 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Brca1P48754 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Brca1P48754 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.11■□□□□ 0.17
Brca1P48754 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brca1P48754 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Brca1P48754 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.1■□□□□ 0.17
Brca1P48754 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Brca1P48754 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.1■□□□□ 0.17
Brca1P48754 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Brca1P48754 Gm10012-201ENSMUST00000078252 192 ntBASIC16.1■□□□□ 0.17
Brca1P48754 Mir497b-201ENSMUST00000093601 125 ntBASIC16.1■□□□□ 0.17
Brca1P48754 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Brca1P48754 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brca1P48754 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Brca1P48754 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brca1P48754 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brca1P48754 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brca1P48754 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brca1P48754 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms