Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Xcl1P47993 AC154855.1-201ENSMUST00000227353 1458 ntBASIC9.48□□□□□ -0.89
Xcl1P47993 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.48□□□□□ -0.89
Xcl1P47993 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Xcl1P47993 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Prkcz2-201ENSMUST00000206136 1756 ntBASIC9.48□□□□□ -0.89
Xcl1P47993 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC9.48□□□□□ -0.89
Xcl1P47993 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC9.48□□□□□ -0.89
Xcl1P47993 Gm25925-201ENSMUST00000158314 306 ntBASIC9.48□□□□□ -0.89
Xcl1P47993 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Gm18421-201ENSMUST00000204122 625 ntBASIC9.48□□□□□ -0.89
Xcl1P47993 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC9.48□□□□□ -0.89
Xcl1P47993 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Xcl1P47993 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Xcl1P47993 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Xcl1P47993 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Xcl1P47993 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Xcl1P47993 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC9.48□□□□□ -0.89
Xcl1P47993 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Xcl1P47993 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.48□□□□□ -0.89
Xcl1P47993 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC9.47□□□□□ -0.89
Xcl1P47993 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Xcl1P47993 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Xcl1P47993 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC9.47□□□□□ -0.89
Xcl1P47993 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Xcl1P47993 Gm15039-201ENSMUST00000118914 875 ntBASIC9.47□□□□□ -0.89
Xcl1P47993 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC9.47□□□□□ -0.89
Xcl1P47993 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Xcl1P47993 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.47□□□□□ -0.89
Xcl1P47993 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Xcl1P47993 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Xcl1P47993 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Xcl1P47993 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.47□□□□□ -0.89
Xcl1P47993 Gm8242-201ENSMUST00000193029 1420 ntBASIC9.47□□□□□ -0.89
Xcl1P47993 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Xcl1P47993 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Xcl1P47993 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Xcl1P47993 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Xcl1P47993 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.46□□□□□ -0.89
Xcl1P47993 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC9.46□□□□□ -0.89
Xcl1P47993 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
Xcl1P47993 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Xcl1P47993 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Xcl1P47993 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Xcl1P47993 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Xcl1P47993 Gm7114-201ENSMUST00000190159 1789 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms