Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HmgclP38060 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HmgclP38060 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HmgclP38060 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.39□□□□□ -0.11
HmgclP38060 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HmgclP38060 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HmgclP38060 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HmgclP38060 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.39□□□□□ -0.11
HmgclP38060 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HmgclP38060 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Gm2810-201ENSMUST00000118681 990 ntBASIC14.38□□□□□ -0.11
HmgclP38060 Gm11745-201ENSMUST00000121669 448 ntBASIC14.38□□□□□ -0.11
HmgclP38060 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.38□□□□□ -0.11
HmgclP38060 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.38□□□□□ -0.11
HmgclP38060 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.38□□□□□ -0.11
HmgclP38060 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.38□□□□□ -0.11
HmgclP38060 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HmgclP38060 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HmgclP38060 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.37□□□□□ -0.11
HmgclP38060 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.37□□□□□ -0.11
HmgclP38060 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HmgclP38060 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.37□□□□□ -0.11
HmgclP38060 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.37□□□□□ -0.11
HmgclP38060 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.37□□□□□ -0.11
HmgclP38060 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.37□□□□□ -0.11
HmgclP38060 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HmgclP38060 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HmgclP38060 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.37□□□□□ -0.11
HmgclP38060 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.37□□□□□ -0.11
HmgclP38060 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HmgclP38060 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
HmgclP38060 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HmgclP38060 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HmgclP38060 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HmgclP38060 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.36□□□□□ -0.11
HmgclP38060 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HmgclP38060 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.36□□□□□ -0.11
HmgclP38060 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HmgclP38060 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HmgclP38060 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HmgclP38060 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HmgclP38060 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HmgclP38060 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms