Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Mmp13P33435 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Gm11779-201ENSMUST00000118541 368 ntBASIC14.97□□□□□ -0.01
Mmp13P33435 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.97□□□□□ -0.01
Mmp13P33435 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Mmp13P33435 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.97□□□□□ -0.01
Mmp13P33435 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Mmp13P33435 Gm5264-201ENSMUST00000190584 848 ntBASIC14.97□□□□□ -0.01
Mmp13P33435 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.97□□□□□ -0.01
Mmp13P33435 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Mmp13P33435 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Mmp13P33435 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.97□□□□□ -0.01
Mmp13P33435 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.96□□□□□ -0.01
Mmp13P33435 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Mmp13P33435 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Mmp13P33435 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Mmp13P33435 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.96□□□□□ -0.01
Mmp13P33435 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Mmp13P33435 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.96□□□□□ -0.01
Mmp13P33435 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp13P33435 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Mmp13P33435 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.96□□□□□ -0.02
Mmp13P33435 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.96□□□□□ -0.02
Mmp13P33435 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Mmp13P33435 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Mmp13P33435 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Mmp13P33435 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Mmp13P33435 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.95□□□□□ -0.02
Mmp13P33435 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Mmp13P33435 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.95□□□□□ -0.02
Mmp13P33435 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.95□□□□□ -0.02
Mmp13P33435 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.95□□□□□ -0.02
Mmp13P33435 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.95□□□□□ -0.02
Mmp13P33435 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.95□□□□□ -0.02
Mmp13P33435 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp13P33435 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Mmp13P33435 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp13P33435 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp13P33435 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp13P33435 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.94□□□□□ -0.02
Mmp13P33435 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp13P33435 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Mmp13P33435 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp13P33435 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.94□□□□□ -0.02
Mmp13P33435 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Mmp13P33435 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp13P33435 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp13P33435 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp13P33435 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.94□□□□□ -0.02
Mmp13P33435 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.94□□□□□ -0.02
Mmp13P33435 Gm11594-201ENSMUST00000122313 162 ntBASIC14.94□□□□□ -0.02
Mmp13P33435 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp13P33435 Gm27300-201ENSMUST00000184085 97 ntBASIC14.94□□□□□ -0.02
Mmp13P33435 Gm27335-201ENSMUST00000184758 97 ntBASIC14.94□□□□□ -0.02
Mmp13P33435 Gm2213-201ENSMUST00000197485 688 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms