Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40P27512 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.21□□□□□ -0.29
Cd40P27512 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40P27512 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40P27512 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40P27512 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40P27512 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40P27512 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40P27512 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cd40P27512 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40P27512 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40P27512 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40P27512 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40P27512 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40P27512 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cd40P27512 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.21□□□□□ -0.3
Cd40P27512 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40P27512 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40P27512 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.21□□□□□ -0.3
Cd40P27512 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cd40P27512 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cd40P27512 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.2□□□□□ -0.3
Cd40P27512 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.2□□□□□ -0.3
Cd40P27512 Gm6736-201ENSMUST00000166583 948 ntBASIC13.2□□□□□ -0.3
Cd40P27512 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.2□□□□□ -0.3
Cd40P27512 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.2□□□□□ -0.3
Cd40P27512 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.2□□□□□ -0.3
Cd40P27512 Gm27702-201ENSMUST00000184512 56 ntBASIC13.2□□□□□ -0.3
Cd40P27512 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.2□□□□□ -0.3
Cd40P27512 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Cd40P27512 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.2□□□□□ -0.3
Cd40P27512 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40P27512 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cd40P27512 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cd40P27512 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.19□□□□□ -0.3
Cd40P27512 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cd40P27512 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cd40P27512 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.19□□□□□ -0.3
Cd40P27512 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Gm25925-201ENSMUST00000158314 306 ntBASIC13.19□□□□□ -0.3
Cd40P27512 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.19□□□□□ -0.3
Cd40P27512 Mir6990-201ENSMUST00000183724 91 ntBASIC13.19□□□□□ -0.3
Cd40P27512 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.19□□□□□ -0.3
Cd40P27512 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.19□□□□□ -0.3
Cd40P27512 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.19□□□□□ -0.3
Cd40P27512 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Cd40P27512 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.19□□□□□ -0.3
Cd40P27512 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cd40P27512 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cd40P27512 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms