Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Efs-202ENSMUST00000227037 2540 ntBASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Gm6736-201ENSMUST00000166583 948 ntBASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Chmp6P0C0A3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Chmp6P0C0A3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Gm5867-201ENSMUST00000063197 592 ntBASIC15.89■□□□□ 0.13
Chmp6P0C0A3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp6P0C0A3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Gm2756-201ENSMUST00000195851 400 ntBASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms